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Haploview 4.2

  • 相关栏目:生物软件/其它生物软件
  • 软件类别:生物软件/英文
  • 授权方式:免费
  • 软件大小:5.95M
  • 运行环境:Win2000/WinXP/Win7
  • 更新时间:
  • 软件来源:http://www.broadinstitute.org/mpg/haploview
  • 下载次数:
软件简介[Introduction]:

Overview

Haploview is designed to simplify and expedite the process of haplotype analysis by providing a common interface to several tasks relating to such analyses. Haploview currently supports the following functionalities:

LD & haplotype block analysis
haplotype population frequency estimation
single SNP and haplotype association tests
permutation testing for association significance
implementation of Paul de Bakker's Tagger tag SNP selection algorithm.
automatic download of phased genotype data from HapMap
visualization and plotting of PLINK whole genome association results including advanced filtering options
Haploview is fully compatible with data dumps from the HapMap project and the Perlegen Genotype Browser. It can analyze thousands of SNPs (tens of thousands in command line mode) in thousands of individuals.

The best way to become familiar with Haploview is to get the software and go through the tutorial. Additional information is available on the documentation page.

Broad Institute Users: You may run the newest version of the program without administrator privileges on your computer by saving the Haploview.jar file to your local user folder and double clicking on it.

单体型分析软件。
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